Information for 14-CTGAATACTT (Motif 18)


Reverse Opposite:

p-value:1e-6
log p-value:-1.594e+01
Information Content per bp:1.620
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets38.0 +/- 19.2bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGAATACTT-
-TGTTTACTTT

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGAATACTT-
-TGTTTACTTT

FOXP2/MA0593.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTGAATACTT
TNTGTTTACTT

vvl/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGAATACTT
-TGAATA---

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTGAATACTT--
TCCATGTTTACTTTG

vvl/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGAATACTT
-TGCATA---

vvl/MA0254.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGAATACTT
-TGCATA---

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGAATACTT
CTGTTTAC--

Foxa2/MA0047.2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGAATACTT---
-TGTTTACTTAGG

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGAATACTT-
CNTGTTTACATA