Information for 15-ATGAGATCTC (Motif 19)


Reverse Opposite:

p-value:1e-6
log p-value:-1.504e+01
Information Content per bp:1.658
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets38.0 +/- 19.1bp
Average Position of motif in Background38.1 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SRD1/MA0389.1/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:ATGAGATCTC-
---AGATCTAC

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---ATGAGATCTC----
NNNCTGATATCTCNNNN

ECM23/MA0293.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATGAGATCTC-
NNNAGATCTNN

GAT3/MA0301.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:ATGAGATCTC--
---AGATCTACA

GAT4/MA0302.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATGAGATCTC-
NNTAGATCTNN

GATA11/MA1014.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATGAGATCTC
--TAGATCTG

AGP1(GATA)/Nicotiana tabacum/AthaMap

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATGAGATCTC-
-TCAGATCTAC

GATA9/MA1018.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGAGATCTC--
-NCAGATCTAGN

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----ATGAGATCTC-----
NDBAGATRWTATCTVNNNNN

GATA8/MA1017.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGAGATCTC
-NNAGATCTN