Information for 12-AAATATTTCCTT (Motif 20)


Reverse Opposite:

p-value:1e-6
log p-value:-1.386e+01
Information Content per bp:1.780
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif17.1
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets37.3 +/- 17.3bp
Average Position of motif in Background38.0 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

cad/dmmpmm(Down)/fly

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AAATATTTCCTT
AAATTTTT----

AHL12/MA0932.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AAATATTTCCTT
AATTAATT----

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAATATTTCCTT
GAATGTTTGTTT

CCA1/MA0972.1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AAATATTTCCTT
AGATATTT----

slp1/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AAATATTTCCTT
-AATATTTACA-

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.72
Offset:3
Orientation:forward strand
Alignment:AAATATTTCCTT-
---TRTTTACTTW

FOXC1/MA0032.2/Jaspar

Match Rank:7
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AAATATTTCCTT-
--ATATTTACATA

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AAATATTTCCTT-
---TGTTTACTTT

SFP1/SacCer-Promoters/Homer

Match Rank:9
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAATATTTCCTT
DDAAAAATTTTY---

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AAATATTTCCTT-
--ATATTTACATA