Information for 18-TGCTGGGTTC (Motif 21)


Reverse Opposite:

p-value:1e-5
log p-value:-1.359e+01
Information Content per bp:1.641
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif26.3
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets32.6 +/- 17.8bp
Average Position of motif in Background35.6 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

che-1/MA0260.1/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:TGCTGGGTTC
----GGTTTC

MA0260.1_che-1/Jaspar

Match Rank:2
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:TGCTGGGTTC
----GGTTTC

OPI1/MA0349.1/Jaspar

Match Rank:3
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:TGCTGGGTTC-
----CGGTTCG

OPI1(MacIsaac)/Yeast

Match Rank:4
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:TGCTGGGTTC-
----CGGTTCG

SWI5(MacIsaac)/Yeast

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGCTGGGTTC
TGCTGGTT--

lin-14/MA0261.1/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TGCTGGGTTC
----GTGTTC

MA0261.1_lin-14/Jaspar

Match Rank:7
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TGCTGGGTTC
----GTGTTC

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGCTGGGTTC---
---TGGTTTCAGT

SWI5/MA0402.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCTGGGTTC
TGCTGGTT--

ACE2/MA0267.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCTGGGTTC
TGCTGGT---