Information for 19-CTCATGCCHG (Motif 22)


Reverse Opposite:

p-value:1e-5
log p-value:-1.358e+01
Information Content per bp:1.585
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets26.9 +/- 13.9bp
Average Position of motif in Background34.4 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hkb/MA0450.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTCATGCCHG
-TCACGCCCC

hkb/dmmpmm(Noyes)/fly

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTCATGCCHG-
CNTCACGCCCCC

TOD6?/SacCer-Promoters/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCATGCCHG
AKCTCATCGC--

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTCATGCCHG--
---ATGCCCACC

INO2/INO2_YPD/1-INO4,2-INO2(Harbison)/Yeast

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCATGCCHG
CACATGC---

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTCATGCCHG
NNACTTGCCTT

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTCATGCCHG
NCTTCCCGCCC-

z/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTCATGCCHG
CACTCA------

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTCATGCCHG
NNTTCCCGCCC-

pros/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTCATGCCHG
--CATGNCT-