Information for 6-ATTCTCCT (Motif 23)


Reverse Opposite:

p-value:1e-5
log p-value:-1.333e+01
Information Content per bp:1.923
Number of Target Sequences with motif126.0
Percentage of Target Sequences with motif3.30%
Number of Background Sequences with motif66.6
Percentage of Background Sequences with motif1.67%
Average Position of motif in Targets37.4 +/- 19.3bp
Average Position of motif in Background39.2 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ttk/MA0460.1/Jaspar

Match Rank:1
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:ATTCTCCT-
ATTATCCTT

ttk/dmmpmm(Noyes)/fly

Match Rank:2
Score:0.83
Offset:-4
Orientation:forward strand
Alignment:----ATTCTCCT--
TTNGATTATCCTTG

dl/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATTCTCCT
GGATTTTCC-

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ATTCTCCT--
---GTCCTAA

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATTCTCCT
-TTTTCCA

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATTCTCCT
CTCATTGTC--

RLR1/RLR1_YPD/[](Harbison)/Yeast

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATTCTCCT----
ATTTTCTTCTTT

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATTCTCCT---
NNTTTATTGTTCTNNN

dl/dmmpmm(Down)/fly

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATTCTCCT
TGGATTTTCC-

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATTCTCCT
CCATTGTTTT