Information for 7-ACACGCAC (Motif 24)


Reverse Opposite:

p-value:1e-5
log p-value:-1.305e+01
Information Content per bp:1.603
Number of Target Sequences with motif462.0
Percentage of Target Sequences with motif12.10%
Number of Background Sequences with motif355.4
Percentage of Background Sequences with motif8.90%
Average Position of motif in Targets40.1 +/- 19.9bp
Average Position of motif in Background35.5 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:ACACGCAC
-CACGCA-

SeqBias: CA-repeat

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-ACACGCAC-
CACACACACA

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--ACACGCAC
TBGCACGCAA

NAC080/MA0939.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ACACGCAC
ACACGCAA

daf-12/MA0538.1/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ACACGCAC----
NACGCACACACACAC

NAC058/MA0938.1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ACACGCAC
ACACGCAA

FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ACACGCAC---
HHCACGCGCBTN

FHY3/MA0557.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ACACGCAC---
CTCACGCGCTCA

T11I18.17/MA0936.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACACGCAC
ACACGCAA

LEC2/MA0581.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACACGCAC--
TGCATGCACAT