Information for 3-ATATATAAATAA (Motif 3)


Reverse Opposite:

p-value:1e-12
log p-value:-2.899e+01
Information Content per bp:1.708
Number of Target Sequences with motif121.0
Percentage of Target Sequences with motif3.17%
Number of Background Sequences with motif36.6
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets36.1 +/- 17.0bp
Average Position of motif in Background37.9 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

zen/dmmpmm(Down)/fly

Match Rank:1
Score:0.80
Offset:2
Orientation:forward strand
Alignment:ATATATAAATAA-
--ATAAAAATAAA

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:ATATATAAATAA
--CTAAAAATAA

PB0019.1_Foxl1_1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ATATATAAATAA----
TAAATGTAAACAAAGGT

bin/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.75
Offset:4
Orientation:forward strand
Alignment:ATATATAAATAA
----ATAAATA-

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ATATATAAATAA
-TATGTAAATAT

SeqBias: TA-repeat

Match Rank:6
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ATATATAAATAA
-TATATATATA-

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ATATATAAATAA-
-TAAGTAAACAAA

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ATATATAAATAA----
AAAAAGTAAACAAAGAC

PB0080.1_Tbp_1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATATATAAATAA---
NANTTATATATAANGN

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ATATATAAATAA
-TATGTAAATAT