Information for 1-CCCAGCYY (Motif 4)


Reverse Opposite:

p-value:1e-11
log p-value:-2.756e+01
Information Content per bp:1.595
Number of Target Sequences with motif1133.0
Percentage of Target Sequences with motif29.68%
Number of Background Sequences with motif905.4
Percentage of Background Sequences with motif22.68%
Average Position of motif in Targets36.4 +/- 19.6bp
Average Position of motif in Background37.5 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ACE2/MA0267.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCCAGCYY
ACCAGCA-

SWI5/Literature(Harbison)/Yeast

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCCAGCYY
-CCAGCA-

SWI5/MA0402.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCYY
AACCAGCA-

TDA9/MA0431.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCCAGCYY
ACCCCGCAC

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGCYY
TGCCCAGNHW

YGR067C/MA0425.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCCAGCYY-----
ACCCCACTTTTTCA

CHA4/MA0283.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCYY
TCTCCGCC-

NHP10/MA0344.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGCYY
TCCCCGGC--

SWI5(MacIsaac)/Yeast

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCYY
AACCAGCA-

SUT1/MA0399.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCCAGCYY
CCCCGCG-