Information for 4-TTTCTTCCWG (Motif 6)


Reverse Opposite:

p-value:1e-10
log p-value:-2.351e+01
Information Content per bp:1.804
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif22.0
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets38.9 +/- 19.3bp
Average Position of motif in Background32.7 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTTCCWG--
TTTTTTTTCNNGTN

zen/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTCTTCCWG
TTTATT----

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTCTTCCWG
NNCTTTATTD---

kni/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTCTTCCWG
TTTGTTCCC-

Eip74EF/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTTCTTCCWG
--ACTTCCTG

Eip74EF/MA0026.1/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TTTCTTCCWG
---CTTCCGG

SFL1/MA0377.1/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCTTCCWG------
TNTTATTTCTTCTATNNNNNA

AZF1/MA0277.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTCTTCCWG
TTTCTTTTT-

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTTCTTCCWG-
-CACTTCCTGT

PB0012.1_Elf3_1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTCTTCCWG---
TTACTTCCTNGTN