Information for 6-AGAGTCTATG (Motif 7)


Reverse Opposite:

p-value:1e-9
log p-value:-2.139e+01
Information Content per bp:1.655
Number of Target Sequences with motif91.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif29.0
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets40.4 +/- 19.4bp
Average Position of motif in Background35.6 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ARG80(MacIsaac)/Yeast

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGAGTCTATG
-GCGTCT---

ARG80/MA0271.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGAGTCTATG
-GCGTCT---

ARG81/MA0272.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGAGTCTATG
NGAGTCAC--

BAS1(MacIsaac)/Yeast

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGAGTCTATG
GNAAGAGTCA---

BAS1/BAS1_SM/2-BAS1(Harbison)/Yeast

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGAGTCTATG
-GAGTCA---

ARG81(MacIsaac)/Yeast

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGAGTCTATG
NGAGTCAC--

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AGAGTCTATG-
NTNNNAGGAGTCTCNTN

cad/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGAGTCTATG
----TTTATG

br-Z2/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGAGTCTATG--
----TCTATTAA

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGAGTCTATG
-GAGTATAA-