Information for 8-ACTTAGAATA (Motif 8)


Reverse Opposite:

p-value:1e-8
log p-value:-1.959e+01
Information Content per bp:1.654
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif31.9
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets38.5 +/- 18.9bp
Average Position of motif in Background37.1 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

br-Z1/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ACTTAGAATA
AAATAGAA--

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACTTAGAATA-
-CCAAAAATAG

KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ACTTAGAATA---
---ARGAATAWWN

inv/dmmpmm(Noyes)/fly

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACTTAGAATA
TAATTAGA---

POU3F3/MA0788.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACTTAGAATA--
AAATTAGCATAAT

Inv/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACTTAGAATA
NTAATTAGAN--

bap/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACTTAGAATA
NCACTTAANN--

PB0079.1_Sry_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACTTAGAATA---
TATAATTATAATATTC

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACTTAGAATA
ACCACTTAA----

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACTTAGAATA-
TAATTTGCATAA