Information for 9-CRCCTGTAAT (Motif 9)


Reverse Opposite:

p-value:1e-7
log p-value:-1.805e+01
Information Content per bp:1.702
Number of Target Sequences with motif150.0
Percentage of Target Sequences with motif3.93%
Number of Background Sequences with motif73.9
Percentage of Background Sequences with motif1.85%
Average Position of motif in Targets35.0 +/- 19.5bp
Average Position of motif in Background37.9 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CRCCTGTAAT
NNCACCTGNN--

TCF3/MA0522.2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CRCCTGTAAT
AACACCTGCT--

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CRCCTGTAAT
TNCCTGCA--

sna/MA0086.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CRCCTGTAAT
CACCTG----

RAV1(2)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CRCCTGTAAT
ATCACCTGAGGC

RAV1(var.2)/MA0583.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CRCCTGTAAT
ATCACCTGAGGC

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CRCCTGTAAT
CGCACCTGCT--

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CRCCTGTAAT
NCACCTGTN--

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CRCCTGTAAT
TACACCTGTC--

esg/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CRCCTGTAAT
NNGCACCTGTNN-