Information for 11-GCAGTGANGC (Motif 11)


Reverse Opposite:

p-value:1e-14
log p-value:-3.450e+01
Information Content per bp:1.579
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif7.29%
Number of Background Sequences with motif20.7
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets44.0 +/- 21.5bp
Average Position of motif in Background37.8 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGANGC-
NNNANTGCAGTGCNNTT

eyg/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGANGC---
NCNNACTCAGTGANTACTC

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCAGTGANGC
TGCAGGNA---

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCAGTGANGC-----
SCAGYCADGCATGAC

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGANGC
NNNNTGCCAGTGATTG

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCAGTGANGC
CGGAAGTGAAAC

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCAGTGANGC
-NCGTGACN-

SOK2(MacIsaac)/Yeast

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCAGTGANGC
GCAGGCAA--

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCAGTGANGC
GCAGTGATTT

ASH1/Literature(Harbison)/Yeast

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCAGTGANGC
--AGTCAA--