Information for 13-ATCACCTGAC (Motif 12)


Reverse Opposite:

p-value:1e-13
log p-value:-3.078e+01
Information Content per bp:1.707
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif4.53%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets36.2 +/- 14.7bp
Average Position of motif in Background45.7 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ATCACCTGAC
ATCACGTGAC

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ATCACCTGAC
ATCACGTGAC

RAV1(2)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ATCACCTGAC--
ATCACCTGAGGC

RAV1(var.2)/MA0583.1/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ATCACCTGAC--
ATCACCTGAGGC

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:ATCACCTGAC
ATCACCCCAC

PL0005.1_hlh-30/Jaspar

Match Rank:6
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---ATCACCTGAC----
AGAATCACGTGACAATT

sna/MA0086.1/Jaspar

Match Rank:7
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:ATCACCTGAC
--CACCTG--

PL0001.1_hlh-11/Jaspar

Match Rank:8
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----ATCACCTGAC--
TCTGATCAGCTGATCG

Optix/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ATCACCTGAC
TATCACNT---

TYE7/TYE7_YPD/39-CBF1(Harbison)/Yeast

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATCACCTGAC
ATCACGTGA-