Information for 18-GGGAGTTTGA (Motif 14)


Reverse Opposite:

p-value:1e-9
log p-value:-2.258e+01
Information Content per bp:1.713
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets39.7 +/- 17.6bp
Average Position of motif in Background37.2 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGGAGTTTGA----
ATTGGACTTTGACCCC

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGGAGTTTGA--
NNNTGGCAGTTGGTNN

SUT2/MA0400.1/Jaspar

Match Rank:3
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAGTTTGA---
NNNNNTTCGGAGTTTNNNNN

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGAGTTTGA--
GGGAATTGTAGT

exd/MA0222.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGGAGTTTGA--
----TTTTGACA

pan/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGGAGTTTGA--
-----TTTGATN

pan/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGGAGTTTGA-
-----TTTGAT

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGTTTGA
TGGCAGTTGN-

exd/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGGAGTTTGA----
----TTTTGACAAA

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGAGTTTGA--
CACGGCAGTTGGTNN