Information for 11-RBWTSAAV (Motif 15)


Reverse Opposite:

p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.435
Number of Target Sequences with motif162.0
Percentage of Target Sequences with motif10.64%
Number of Background Sequences with motif63.5
Percentage of Background Sequences with motif4.54%
Average Position of motif in Targets37.3 +/- 19.4bp
Average Position of motif in Background32.7 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL005.1_DPE/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RBWTSAAV
NACATCTTN

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RBWTSAAV--
ACATCAAAGG

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RBWTSAAV----
AAAGATCAAAGGAA

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:RBWTSAAV----
ACATCAAAGGNA

pan/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:RBWTSAAV-
-GATCAAAG

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---RBWTSAAV------
TATAGATCAAAGGAAAA

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---RBWTSAAV------
TATAGATCAAAGGAAAA

pan/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RBWTSAAV
-TATCAAA

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--RBWTSAAV
CGGTTTCAAA

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RBWTSAAV--
ACWTCAAAGG