Information for 12-CCTTCCTT (Motif 17)


Reverse Opposite:

p-value:1e-6
log p-value:-1.433e+01
Information Content per bp:1.895
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif3.48%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets36.4 +/- 20.5bp
Average Position of motif in Background36.8 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Eip74EF/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CCTTCCTT
ACTTCCTG

GCR2/MA0305.1/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CCTTCCTT
GCTTCCT-

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CCTTCCTT--
ACTTCCTGBT

Eip74EF/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CCTTCCTT
ATACTTCCT-

GCR2(MacIsaac)/Yeast

Match Rank:5
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CCTTCCTT
GCTTCCN-

Eip74EF/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CCTTCCTT--
ACTTCCTGTT

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCTTCCTT--
NNAYTTCCTGHN

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCTTCCTT--
ACTTCCTBGT

RME1(MacIsaac)/Yeast

Match Rank:9
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CCTTCCTT----
--TTCCTTTGGA

Eip74EF/MA0026.1/Jaspar

Match Rank:10
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCTTCCTT
-CTTCCGG