Information for 23-GTTTCCATCT (Motif 18)


Reverse Opposite:

p-value:1e-6
log p-value:-1.387e+01
Information Content per bp:1.658
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif3.68%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets38.9 +/- 19.6bp
Average Position of motif in Background29.9 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCATCT
ATTTTCCATT-

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCATCT
ATTTTCCATT-

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCATCT
ATTTTCCATT-

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCATCT
ATTTTCCATT-

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTTTCCATCT
TTTTCCA---

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCCATCT--
CAGTTTCGNTTCTN

HSF1/MA0319.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTTTCCATCT
TGTTCCAT--

AGL27/MA1012.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCATCT----
ACTTTCTATTTTTGG

AGL15/MA0548.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTTTCCATCT------
-TTTCCATTTTTGGAA

exd/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTTTCCATCT-
-TTTNGATTTA