Information for 25-AAACCAAACC (Motif 20)


Reverse Opposite:

p-value:1e-4
log p-value:-1.015e+01
Information Content per bp:1.677
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets28.8 +/- 15.6bp
Average Position of motif in Background21.8 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPT23/SPT23_YPD/[](Harbison)/Yeast

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAACCAAACC
GAAATCAA---

SPT23(MacIsaac)/Yeast

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAACCAAACC
GAAATCAA---

PB0033.1_Irf3_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAACCAAACC-
GAGAACCGAAACTG

SPT23/MA0388.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAACCAAACC
GAAATCAA---

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAACCAAACC--
ATAAACCGAAACCAA

PB0037.1_Isgf3g_1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAACCAAACC--
CAAAATCGAAACTAA

br(var.3)/MA0012.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAACCAAACC
TAAACTAAAAG

exd/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAACCAAACC
TAAAACAAAA--

br-Z3/dmmpmm(Down)/fly

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAACCAAACC
ATAAACAAAA--

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAACCAAACC
GAAASYGAAASY