Information for 7-CCGAGTAGCT (Motif 9)


Reverse Opposite:

p-value:1e-18
log p-value:-4.280e+01
Information Content per bp:1.702
Number of Target Sequences with motif149.0
Percentage of Target Sequences with motif9.79%
Number of Background Sequences with motif30.3
Percentage of Background Sequences with motif2.16%
Average Position of motif in Targets38.5 +/- 17.5bp
Average Position of motif in Background42.6 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Deaf1/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCGAGTAGCT
CCGAAGCGCT

odd/MA0454.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCGAGTAGCT-
AACAGTAGCAG

odd/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCGAGTAGCT
AACAGTAGCA

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCGAGTAGCT---
ATGTACAGTAGCAAAG

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCGAGTAGCT---
ATTTACAGTAGCAAAA

Deaf1/dmmpmm(Down)/fly

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCGAGTAGCT
GCCCGAAGCGCT

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCGAGTAGCT---
NNNTTAGGTAGCNTNT

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCGAGTAGCT---
NNTGTAGGTAGCANNT

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CCGAGTAGCT-
------NGCTN

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCGAGTAGCT---
---AGCAGCTGCT