Information for 17-CAAGTAGCTG (Motif 11)


Reverse Opposite:

p-value:1e-14
log p-value:-3.389e+01
Information Content per bp:1.755
Number of Target Sequences with motif156.0
Percentage of Target Sequences with motif4.09%
Number of Background Sequences with motif51.2
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets32.6 +/- 17.2bp
Average Position of motif in Background35.6 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1(MacIsaac)/Yeast

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CAAGTAGCTG
---GAGGCTG

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CAAGTAGCTG--
--AGCAGCTGCT

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CAAGTAGCTG-
-CAGCAGCTGN

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAAGTAGCTG--
NNAGCAGCTGCT

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CAAGTAGCTG--
--CGCAGCTGCG

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CAAGTAGCTG--
NNTGTAGGTAGCANNT

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTAGCTG-----
NNNNAGCAGCTGCTGAN

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CAAGTAGCTG--
NNNTTAGGTAGCNTNT

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CAAGTAGCTG---
--GACAGCTGCAG

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CAAGTAGCTG
--AACAGCTG