Information for 12-CACCTCGG (Motif 12)


Reverse Opposite:

p-value:1e-14
log p-value:-3.315e+01
Information Content per bp:1.910
Number of Target Sequences with motif172.0
Percentage of Target Sequences with motif4.51%
Number of Background Sequences with motif62.7
Percentage of Background Sequences with motif1.56%
Average Position of motif in Targets37.5 +/- 21.0bp
Average Position of motif in Background38.8 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CACCTCGG
TGACACCT---

sna/MA0086.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CACCTCGG
CACCTG--

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------CACCTCGG-
NNGGCGACACCTCNNN

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACCTCGG
NNCACCTGNN

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CACCTCGG
TCACACCT---

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACCTCGG
CGCACCTGCT

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACCTCGG
AACACCTGCT

RAV1(2)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACCTCGG--
ATCACCTGAGGC

RAV1(var.2)/MA0583.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACCTCGG--
ATCACCTGAGGC

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CACCTCGG
TCACACCT---