Information for 18-AATGGRGTYT (Motif 13)


Reverse Opposite:

p-value:1e-13
log p-value:-3.172e+01
Information Content per bp:1.639
Number of Target Sequences with motif184.0
Percentage of Target Sequences with motif4.82%
Number of Background Sequences with motif73.0
Percentage of Background Sequences with motif1.81%
Average Position of motif in Targets37.2 +/- 18.5bp
Average Position of motif in Background35.9 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Hr46/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AATGGRGTYT
AATTGGGTCA

ADR1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AATGGRGTYT
--NGGAGG--

ADR1(MacIsaac)/Yeast

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AATGGRGTYT
--NGGAGG--

ADR1/MA0268.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AATGGRGTYT
-GTGGGGT--

ARG80(MacIsaac)/Yeast

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AATGGRGTYT
----GCGTCT

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATGGRGTYT----
NNATTGGACTTTNGNN

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AATGGRGTYT----
NTNNNAGGAGTCTCNTN

ARG80/MA0271.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AATGGRGTYT
----GCGTCT

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------AATGGRGTYT
NNTNNACAATGGGANNN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AATGGRGTYT-
-CTGTGGTTTN