Information for 17-GTGATCTSCCCA (Motif 16)


Reverse Opposite:

p-value:1e-11
log p-value:-2.613e+01
Information Content per bp:1.495
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets38.5 +/- 17.3bp
Average Position of motif in Background28.1 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:GTGATCTSCCCA--
-----CTGCCCGCA

Ik-1

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTGATCTSCCCA---
--GGTATTCCCAANN

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GTGATCTSCCCA--
-----ATGCCCACC

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTGATCTSCCCA-----
-GGGTGTGCCCAAAAGG

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GTGATCTSCCCA
------TGCCAA

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GTGATCTSCCCA
------TCCCCA

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTGATCTSCCCA-
----CGTGCCAAG

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GTGATCTSCCCA----
------TGCCCAGNHW

dl-B/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGATCTSCCCA
GGGAATTCCCC-

ADR1/MA0268.1/Jaspar

Match Rank:10
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GTGATCTSCCCA-
------ACCCCAC