Information for 22-TGCAAACTCC (Motif 17)


Reverse Opposite:

p-value:1e-10
log p-value:-2.461e+01
Information Content per bp:1.846
Number of Target Sequences with motif99.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets39.6 +/- 20.1bp
Average Position of motif in Background31.5 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGCAAACTCC
AGATGCAATCCC-

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGCAAACTCC-
-GGAAATTCCC

byn/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGCAAACTCC
GTGCGAATT--

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCAAACTCC-
-GGAAATTCCC

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAACTCC
TGATGCAATC---

sna/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCAAACTCC-
--CAACCTGCT

PB0161.1_Rxra_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCAAACTCC----
NNNNCAACCTTCGNGA

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGCAAACTCC
TCCATGCAAA----

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAACTCC
NATGTTGCAA-----

PHD1/MA0355.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGCAAACTCC
ACCTGCAGCA---