Information for 18-ATGATGGTTTCC (Motif 18)


Reverse Opposite:

p-value:1e-10
log p-value:-2.332e+01
Information Content per bp:1.535
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets40.2 +/- 17.6bp
Average Position of motif in Background30.8 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

che-1/MA0260.1/Jaspar

Match Rank:1
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:ATGATGGTTTCC
-----GGTTTC-

MA0260.1_che-1/Jaspar

Match Rank:2
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:ATGATGGTTTCC
-----GGTTTC-

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:ATGATGGTTTCC--
----TGGTTTCAGT

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATGATGGTTTCC----
TNNNATGATTTCNNCNN

SPT23/SPT23_YPD/[](Harbison)/Yeast

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATGATGGTTTCC
---TTGATTTC-

SPT23(MacIsaac)/Yeast

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATGATGGTTTCC
---TTGATTTC-

grh/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ATGATGGTTTCC
---CTGGTTC--

onecut/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATGATGGTTTCC
-NNTTGATTTG-

pan/dmmpmm(Down)/fly

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ATGATGGTTTCC
----TGTTTTT-

SPT23/MA0388.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ATGATGGTTTCC
---TTGATTTC-