Information for 16-CCACGTTG (Motif 19)


Reverse Opposite:

p-value:1e-9
log p-value:-2.211e+01
Information Content per bp:1.719
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif34.9
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets41.2 +/- 21.1bp
Average Position of motif in Background31.1 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP68/MA0968.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CCACGTTG
GCCACGTNN

PIF3(2)(bHLH)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----CCACGTTG----
NNGGNCCACGTGGCCNT

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CCACGTTG--
CCACGTGGNN

SPT/MA1061.1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCACGTTG
CCCACGTGC

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CCACGTTG
GCACGTNC

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CCACGTTG--
CCACGTGGNN

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CCACGTTG-
-CACGTGGC

MAX::MYC/MA0059.1/Jaspar

Match Rank:8
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCACGTTG--
ACCACGTGCTC

PHO4(MacIsaac)/Yeast

Match Rank:9
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCACGTTG
-CACGTGG

EmBP-1/MA0128.1/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCACGTTG
CCACGTGT