Information for 23-CGCTCTGTCA (Motif 20)


Reverse Opposite:

p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.678
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets35.1 +/- 18.0bp
Average Position of motif in Background25.3 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

achi/MA0207.1/Jaspar

Match Rank:1
Score:0.84
Offset:4
Orientation:reverse strand
Alignment:CGCTCTGTCA
----CTGTCA

hth/MA0227.1/Jaspar

Match Rank:2
Score:0.82
Offset:4
Orientation:reverse strand
Alignment:CGCTCTGTCA
----CTGTCA

vis/MA0252.1/Jaspar

Match Rank:3
Score:0.82
Offset:4
Orientation:reverse strand
Alignment:CGCTCTGTCA
----CTGTCA

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:CGCTCTGTCA-
---GCTGTCAA

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.80
Offset:4
Orientation:reverse strand
Alignment:CGCTCTGTCA-
----NTGTCAN

Hth/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:CGCTCTGTCA---
---NCTGTCANAG

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:CGCTCTGTCA-
---CCTGTCAA

Vis/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:CGCTCTGTCA---
---NCTGTCANNT

TOS8/MA0408.1/Jaspar

Match Rank:9
Score:0.77
Offset:4
Orientation:forward strand
Alignment:CGCTCTGTCA--
----CTGTCAAA

Achi/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:CGCTCTGTCA---
---GCTGTCAAAN