Information for 21-TTCATCCATBTH (Motif 21)


Reverse Opposite:

p-value:1e-7
log p-value:-1.712e+01
Information Content per bp:1.558
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets34.9 +/- 20.3bp
Average Position of motif in Background37.1 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AT/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTCATCCATBTH
ATTCGTTCAT---

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTCATCCATBTH-
-GCNGCCATCTTG

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTCATCCATBTH
NNCATTCATTCATNNN

SFL1/MA0377.1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TTCATCCATBTH---
TNTTATTTCTTCTATNNNNNA

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTCATCCATBTH
GYCATCMATCAT

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTCATCCATBTH---
-ACATTCATGACACG

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTCATCCATBTH-
-GCCGCCATCTTG

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTCATCCATBTH--
GACCACATTCATACAAT

POL002.1_INR/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTCATCCATBTH
-TCAGTCTT---

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTCATCCATBTH-
---AACCTTATAT