Information for 25-CAACTACCTC (Motif 22)


Reverse Opposite:

p-value:1e-7
log p-value:-1.654e+01
Information Content per bp:1.660
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets42.6 +/- 20.0bp
Average Position of motif in Background41.6 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB.PH3(2)(MYB)/Petunia hybrida/AthaMap

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CAACTACCTC--
GTAACTAACTTTT

Tag/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CAACTACCTC
---CTACCTG

MYB4/MA1039.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CAACTACCTC
CACCTACC--

AtMYB84(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAACTACCTC--
CCACCTACCCCCC

RAX3/MA0576.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAACTACCTC--
CCACCTACCCCCC

MYB111/MA1036.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAACTACCTC
TACCTACC--

Aef1/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAACTACCTC
CAACAACA--

MOT3/Literature(Harbison)/Yeast

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CAACTACCTC
----TACCTN

MOT3(MacIsaac)/Yeast

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CAACTACCTC
----TACCTN

MOT3/MA0340.1/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CAACTACCTC
----TACCTN