Information for 19-GTTCAAGA (Motif 23)


Reverse Opposite:

p-value:1e-5
log p-value:-1.288e+01
Information Content per bp:1.892
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif39.7
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets35.3 +/- 18.3bp
Average Position of motif in Background35.3 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ct/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--GTTCAAGA
NNGTTCAAGN

ct/MA0218.1/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GTTCAAGA
GTTCAA--

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----GTTCAAGA----
CTAAGGTTCTAGATCAC

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----GTTCAAGA---
BCNGGTTCTAGANCN

vnd/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTTCAAGA--
GCTCAAGTGC

lin-14/MA0261.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTCAAGA
GTGTTC----

MA0261.1_lin-14/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTCAAGA
GTGTTC----

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTTCAAGA---
AGGTCAAGGTCA

PB0197.1_Zfp105_2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTTCAAGA------
ATGGTTCAATAATTTTG

WRKY63/MA1092.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTTCAAGA
CGGTCAAC-