Information for 20-ACCGTGGC (Motif 24)


Reverse Opposite:

p-value:1e-5
log p-value:-1.269e+01
Information Content per bp:1.863
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets32.0 +/- 17.8bp
Average Position of motif in Background27.1 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MET31/MA0333.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:ACCGTGGC-
AGTGTGGCG

MET32/MA0334.1/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:ACCGTGGC-
--TGTGGCG

MET32(MacIsaac)/Yeast

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ACCGTGGC
AAACTGTGGC

RPN4/MA0373.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:forward strand
Alignment:ACCGTGGC-
--GGTGGCG

bZIP68/MA0968.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ACCGTGGC
CCACGTGGC

CRZ1/MA0285.1/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:ACCGTGGC----
---GTGGCTNNG

MET28/MA0332.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACCGTGGC
-CTGTGG-

MET28(MacIsaac)/Yeast

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACCGTGGC
-CTGTGG-

E-box/Arabidopsis-Promoters/Homer

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACCGTGGC
CACGTGGC

RPN4(MacIsaac)/Yeast

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACCGTGGC----
-CGGTGGCAAAA