Information for 25-CTCGTGATCCAC (Motif 25)


Reverse Opposite:

p-value:1e-5
log p-value:-1.182e+01
Information Content per bp:1.914
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets33.3 +/- 15.0bp
Average Position of motif in Background65.2 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)-1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CTCGTGATCCAC
NCACGTGACN---

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTCGTGATCCAC
---ATAATCCC-

TYE7/TYE7_YPD/39-CBF1(Harbison)/Yeast

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTCGTGATCCAC
TCACGTGAT----

TYE7(MacIsaac)/Yeast

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTCGTGATCCAC
CACGTGAC----

GATA15/MA1016.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTCGTGATCCAC
--TATGATCAG-

MLX/MA0663.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCGTGATCCAC
ATCACGTGAT----

Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCGTGATCCAC
TCACGTGAYH---

Arntl/MA0603.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCGTGATCCAC
NCACGTGACN---

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCGTGATCCAC
GTCACGTGAT----

BIM1/MA0964.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCGTGATCCAC
GCACGTGACC---