Information for 5-TTTCTTTG (Motif 6)


Reverse Opposite:

p-value:1e-31
log p-value:-7.301e+01
Information Content per bp:1.606
Number of Target Sequences with motif1391.0
Percentage of Target Sequences with motif36.44%
Number of Background Sequences with motif973.8
Percentage of Background Sequences with motif24.21%
Average Position of motif in Targets37.2 +/- 20.2bp
Average Position of motif in Background36.4 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RME1(MacIsaac)/Yeast

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTTCTTTG--
TTCCTTTGGA

RME1/MA0370.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TTTCTTTG--
TTCCTTTGGA

AZF1/MA0277.1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTTCTTTG-
TTTCTTTTT

Dof2/MA0020.1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TTTCTTTG
-NGCTTT-

MNB1A/MA0053.1/Jaspar

Match Rank:5
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TTTCTTTG
--GCTTT-

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTTTG-------
NNTTCCTTTGATCTNNA

PBF/MA0064.1/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TTTCTTTG
--GCTTT-

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTTCTTTG-------
ANTCCTTTGTCTNNNN

DOF2(C2C2(Zn) Dof)/Zea mays/AthaMap

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTTCTTTG---
NNGCTTTANNN

pan/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.72
Offset:3
Orientation:forward strand
Alignment:TTTCTTTG--
---CTTTGAT