Information for 6-TGAGACAGGA (Motif 7)


Reverse Opposite:

p-value:1e-28
log p-value:-6.462e+01
Information Content per bp:1.662
Number of Target Sequences with motif261.0
Percentage of Target Sequences with motif6.84%
Number of Background Sequences with motif75.7
Percentage of Background Sequences with motif1.88%
Average Position of motif in Targets35.4 +/- 16.0bp
Average Position of motif in Background38.4 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGAGACAGGA
TGAGTCA---

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGAGACAGGA
TGACTCAGCA

DIG1/DIG1_YPD/32-STE12(Harbison)/Yeast

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGAGACAGGA
TGAAACA---

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGAGACAGGA
TGAGTCA---

Ap1/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGAGACAGGA
GTGACTCAG--

SPT2/SPT2_YPD/[](Harbison)/Yeast

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGAGACAGGA
TTAGAGACAGG-

Six4/MA0204.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGAGACAGGA
TGATAC----

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGAGACAGGA
GATGAGTCAT--

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGAGACAGGA
GCTGASTCAGCA

STE12/STE12_Alpha/92-STE12(Harbison)/Yeast

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGAGACAGGA
TGAAACA---