Information for 1-TGCTGARGCA (Motif 1)


Reverse Opposite:

p-value:1e-9
log p-value:-2.257e+01
Information Content per bp:1.709
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif4.23%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets38.7 +/- 18.5bp
Average Position of motif in Background43.3 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TGCTGARGCA-
HTGCTGAGTCAT

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGARGCA----
NTGCTGAGTCATCCN

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGCTGARGCA--
TGCTGAGTCATC

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----TGCTGARGCA-
AWWNTGCTGAGTCAT

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGCTGARGCA
TGCTGACTCA

MAF::NFE2/MA0501.1/Jaspar

Match Rank:6
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TGCTGARGCA-
AAANTGCTGAGTCAT

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TGCTGARGCA
TGCTGAGTCA

Nfe2l2/MA0150.2/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGCTGARGCA-----
TGCTGAGTCATNNTG

SWI5/Literature(Harbison)/Yeast

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGCTGARGCA
GGCTGA----

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGCTGARGCA-
AAANTGCTGACTNAG