Information for 2-AAATGGWGATTC (Motif 14)


Reverse Opposite:

p-value:1e-5
log p-value:-1.187e+01
Information Content per bp:1.792
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets36.6 +/- 17.1bp
Average Position of motif in Background38.4 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

dif/Rel/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAATGGWGATTC---
----GGGGAATCCCC

ARG81(MacIsaac)/Yeast

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AAATGGWGATTC-
-----GTGACTCN

Rel/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAATGGWGATTC---
----NGGGATTCCCC

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AAATGGWGATTC-
---GGGGATTTCC

ARG81/MA0272.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAATGGWGATTC-
-----GTGACTCT

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AAATGGWGATTC-
---CNGTGATTTN

STE12(MacIsaac)/Yeast

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AAATGGWGATTC-
------TGTTTCA

JUN(var.2)/MA0489.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAATGGWGATTC--
AGGAGATGACTCAT

FOSL1/MA0477.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAATGGWGATTC---
----GGTGACTCATG

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAATGGWGATTC-
---GGGAATTTCC