Information for 15-CTACTCAGGA (Motif 15)


Reverse Opposite:

p-value:1e-4
log p-value:-1.031e+01
Information Content per bp:1.803
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets39.1 +/- 18.4bp
Average Position of motif in Background44.8 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CTACTCAGGA-
----TTAGGAC

MCM1/MA0331.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTACTCAGGA-
CCCAATTAGGAA

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTACTCAGGA-
-TTCTNMGGAA

MCM1/MCM1_Alpha/35-MCM1(Harbison)/Yeast

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTACTCAGGA--
CCCGATTGGGAAA

ECM22/MA0292.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTACTCAGGA-
----TCCGGAN

Stat6/MA0520.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTACTCAGGA----
ANTTCTCAGGAANNN

ASH1/MA0276.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTACTCAGGA
CCGGATCGGG-

NDD1/NDD1_YPD/14-MCM1(Harbison)/Yeast

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTACTCAGGA--
CCCNATTGGGAAA

ttk/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTACTCAGGA--
-----CAGGACC

ASH1(MacIsaac)/Yeast

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTACTCAGGA
CCGGATCGGG-