Information for 17-TCATGAGATC (Motif 18)


Reverse Opposite:

p-value:1e-4
log p-value:-1.010e+01
Information Content per bp:1.540
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets44.1 +/- 18.1bp
Average Position of motif in Background38.7 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ems/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TCATGAGATC
TAATGACA--

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCATGAGATC
NTAATGAGCT-

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TCATGAGATC--
GACGATAATGAGCTTGC

PH0058.1_Hoxb3/Jaspar

Match Rank:4
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TCATGAGATC-
TNNNACTAATTAGNTCA

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TCATGAGATC--
AAACATAATGAGGTTGC

zen/MA0256.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCATGAGATC
TCATTAG---

GAT3(MacIsaac)/Yeast

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCATGAGATC
-CATGTTAT-

ECM23/MA0293.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCATGAGATC----
---AAAGATCTAAA

SRD1/MA0389.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCATGAGATC-
---GTAGATCT

PH0014.1_Cphx/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCATGAGATC--
NTTGATTNNATCAN