Information for 4-TGTTTGTTTTTT (Motif 19)


Reverse Opposite:

p-value:1e-4
log p-value:-9.472e+00
Information Content per bp:1.855
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets39.2 +/- 17.5bp
Average Position of motif in Background22.4 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: polyA-repeat

Match Rank:1
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:TGTTTGTTTTTT
--TTTTTTTTTT

hb/dmmpmm(Noyes)/fly

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGTTTGTTTTTT
TGTTTTTTTNGT

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGTTTGTTTTTT---
NTNTTGTTGTTTGTN

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TGTTTGTTTTTT
GAATGTTTGTTT---

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGTTTGTTTTTT
TGTTTATTT---

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTGTTTTTT----
NNNNTTTTTTTTTNAAC

br-Z1/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGTTTGTTTTTT-
-ACTTGTCAATTA

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTGTTTTTT--
NCNTTTGTTATTTNN

HCM1/MA0317.1/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TGTTTGTTTTTT
---TTGTTTAT-

RLR1?/SacCer-Promoters/Homer

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGTTTGTTTTTT
WTTTTCYYTTTT