Information for 1-GGGAGGCTGAGG (Motif 2)


Reverse Opposite:

p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.604
Number of Target Sequences with motif132.0
Percentage of Target Sequences with motif9.79%
Number of Background Sequences with motif56.4
Percentage of Background Sequences with motif4.03%
Average Position of motif in Targets39.5 +/- 17.8bp
Average Position of motif in Background42.4 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1(MacIsaac)/Yeast

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGAGGCTGAGG
--GAGGCTG---

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGGAGGCTGAGG
--GAGSCCGAGC

CRZ1/MA0285.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGGAGGCTGAGG
--GTGGCTNNG-

bZIP910(2)(bZIP)/Antirrhinum majus/AthaMap

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGAGGCTGAGG-
-GGGTGCTGACGT

Dip3/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGAGGCTGAGG
GGNANGGNGTGG

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGAGGCTGAGG-
-ACAGGATGTGGT

SWI5/Literature(Harbison)/Yeast

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGGAGGCTGAGG
----GGCTGA--

ADR1/Literature(Harbison)/Yeast

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGAGGCTGAGG
NGGAGG------

ADR1(MacIsaac)/Yeast

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGAGGCTGAGG
NGGAGG------

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGAGGCTGAGG--
AAGGKGRCGCAGGCA