Information for 1-TATCTTCC (Motif 4)


Reverse Opposite:

p-value:1e-8
log p-value:-1.896e+01
Information Content per bp:1.794
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif6.08%
Number of Background Sequences with motif26.5
Percentage of Background Sequences with motif1.90%
Average Position of motif in Targets38.6 +/- 18.7bp
Average Position of motif in Background38.8 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCR2/MA0305.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:TATCTTCC-
--GCTTCCT

GCR2(MacIsaac)/Yeast

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:TATCTTCC-
--GCTTCCN

GCR1/MA0304.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TATCTTCC-
-GGCTTCCA

Eip74EF/MA0026.1/Jaspar

Match Rank:4
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:TATCTTCC--
---CTTCCGG

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TATCTTCC
--GCTTCC

MF0001.1_ETS_class/Jaspar

Match Rank:6
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TATCTTCC---
---CTTCCGGT

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TATCTTCC-
--TTTTCCA

kni/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TATCTTCC-
TTTGTTCCC

PB0012.1_Elf3_1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TATCTTCC-----
TTACTTCCTNGTN

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TATCTTCC---
-ATTTTCCATT