Information for 4-TCTCCCAAAG (Motif 6)


Reverse Opposite:

p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.669
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif3.78%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets34.7 +/- 19.2bp
Average Position of motif in Background37.3 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PBF/MA0064.1/Jaspar

Match Rank:1
Score:0.66
Offset:6
Orientation:forward strand
Alignment:TCTCCCAAAG-
------AAAGC

MNB1A/MA0053.1/Jaspar

Match Rank:2
Score:0.65
Offset:6
Orientation:forward strand
Alignment:TCTCCCAAAG-
------AAAGC

MET28/MA0332.1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TCTCCCAAAG
----CCACAG

MET28(MacIsaac)/Yeast

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TCTCCCAAAG
----CCACAG

pan/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCTCCCAAAG
---ATCAAAG

Dof3/MA0021.1/Jaspar

Match Rank:6
Score:0.65
Offset:6
Orientation:forward strand
Alignment:TCTCCCAAAG--
------AAAGCG

Dof2/MA0020.1/Jaspar

Match Rank:7
Score:0.65
Offset:6
Orientation:forward strand
Alignment:TCTCCCAAAG--
------AAAGCA

HAP2/MA0313.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TCTCCCAAAG
---ACCAA--

Su(H)/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCTCCCAAAG
-CTCCCAC--

schlank/MA0193.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCTCCCAAAG
-CTACCAA--