Information for 6-KACAAACCTK (Motif 7)


Reverse Opposite:

p-value:1e-7
log p-value:-1.722e+01
Information Content per bp:1.829
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets35.7 +/- 18.1bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ID1(C2H2(Zn))/Zea mays/AthaMap

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----KACAAACCTK
AAAACGACAAA----

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:KACAAACCTK
-CCTCACCTG

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-KACAAACCTK
NNACTTACCTN

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KACAAACCTK
AACAAT----

P(MYB)/Zea mays/AthaMap

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:KACAAACCTK
-ACCTACCCG

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--KACAAACCTK
RNAACAATGG--

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:KACAAACCTK
-ACAAAG---

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--KACAAACCTK
VRRACAAWGG--

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:KACAAACCTK
NANANAC---

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:KACAAACCTK
-TCACACCT-