Information for 7-TTTAATCAAA (Motif 8)


Reverse Opposite:

p-value:1e-7
log p-value:-1.623e+01
Information Content per bp:1.653
Number of Target Sequences with motif93.0
Percentage of Target Sequences with motif6.90%
Number of Background Sequences with motif37.6
Percentage of Background Sequences with motif2.69%
Average Position of motif in Targets35.1 +/- 17.7bp
Average Position of motif in Background36.0 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---TTTAATCAAA----
GGGTTTAATTAAAATTC

onecut/MA0235.1/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:TTTAATCAAA
--AAATCAA-

pan/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.75
Offset:4
Orientation:forward strand
Alignment:TTTAATCAAA
----ATCAAA

onecut/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TTTAATCAAA-
-CAAATCAANN

PH0100.1_Lmx1a/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TTTAATCAAA----
CGAATTAATTAAAAACC

ara/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TTTAATCAAA
---AATCAA-

Antp/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TTTAATCAAA
TTTTAATGAA-

Otp/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TTTAATCAAA
NTTTAATTAA-

Antp/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTTAATCAAA
TTTAATTA--

PH0101.1_Lmx1b/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTTAATCAAA----
NNAATTAATTAAAAANN