Information for 1-WTGCCCAGCC (Motif 1)


Reverse Opposite:

p-value:1e-28
log p-value:-6.487e+01
Information Content per bp:1.670
Number of Target Sequences with motif245.0
Percentage of Target Sequences with motif33.02%
Number of Background Sequences with motif61.5
Percentage of Background Sequences with motif9.23%
Average Position of motif in Targets36.8 +/- 20.3bp
Average Position of motif in Background34.1 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:WTGCCCAGCC-
-TGCCCAGNHW

ACE2/MA0267.1/Jaspar

Match Rank:2
Score:0.84
Offset:3
Orientation:forward strand
Alignment:WTGCCCAGCC
---ACCAGCA

SWI5/MA0402.1/Jaspar

Match Rank:3
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:WTGCCCAGCC
--AACCAGCA

SWI5/Literature(Harbison)/Yeast

Match Rank:4
Score:0.82
Offset:4
Orientation:reverse strand
Alignment:WTGCCCAGCC
----CCAGCA

SWI5(MacIsaac)/Yeast

Match Rank:5
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:WTGCCCAGCC
--AACCAGCA

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:6
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:WTGCCCAGCC
---ACCAGCA

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:WTGCCCAGCC
---CACAGN-

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-WTGCCCAGCC
HTTTCCCASG-

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:WTGCCCAGCC-------
--TCCCAGMCRAGCCCC

CRZ1(MacIsaac)/Yeast

Match Rank:10
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:WTGCCCAGCC--
-----CAGCCAC