Information for 4-GGCATGARCC (Motif 6)


Reverse Opposite:

p-value:1e-9
log p-value:-2.277e+01
Information Content per bp:1.480
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif9.16%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif1.78%
Average Position of motif in Targets34.3 +/- 17.9bp
Average Position of motif in Background42.4 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGCATGARCC
TTTGCATGGA--

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGCATGARCC
TGCATGCA--

LEC2/MA0581.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGCATGARCC
ATGTGCATGNN--

hkb/MA0450.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCATGARCC
GGGGCGTGA---

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCATGARCC
TGGGGAAGGGCM

ttk/dmmpmm(Papatsenko)/fly

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCATGARCC
GCCAGGACC-

TEC1/TEC1_YPD/[](Harbison)/Yeast

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCATGARCC
AGGAATG----

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCATGARCC
CWGGCGGGAA--

ABI3/MA0564.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCATGARCC
CTGCATGCA--

hkb/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGCATGARCC
GGGGGCGTGANG-