Information for 5-TTCTWCTGYC (Motif 7)


Reverse Opposite:

p-value:1e-9
log p-value:-2.130e+01
Information Content per bp:1.725
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif12.67%
Number of Background Sequences with motif25.1
Percentage of Background Sequences with motif3.77%
Average Position of motif in Targets33.9 +/- 16.6bp
Average Position of motif in Background43.9 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTCTWCTGYC
-GCTTCC---

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTCTWCTGYC
CKTCKTCTTY-

SFL1/MA0377.1/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TTCTWCTGYC-----
TNTTATTTCTTCTATNNNNNA

SeqBias: G/A bias

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTCTWCTGYC
CCCCCCCCCC

PEND/MA0127.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTCTWCTGYC
ACTTCTTATT--

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCTWCTGYC-
NCTTCCCGCCC

RLR1/RLR1_YPD/[](Harbison)/Yeast

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTCTWCTGYC
ATTTTCTTCTTT-

AZF1/MA0277.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTCTWCTGYC
TTTCTTTTT--

grh/dmmpmm(Papatsenko)/fly

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCTWCTGYC
TACCTGCT---

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTCTWCTGYC---
TNNTGCTACTGTNNNN