Information for 1-GTTGGGCG (Motif 1)


Reverse Opposite:

p-value:1e-27
log p-value:-6.243e+01
Information Content per bp:1.827
Number of Target Sequences with motif319.0
Percentage of Target Sequences with motif23.66%
Number of Background Sequences with motif114.6
Percentage of Background Sequences with motif8.50%
Average Position of motif in Targets33.7 +/- 19.3bp
Average Position of motif in Background34.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GTTGGGCG-------
NNNTNGGGCGTATNNTN

PCF/Arabidopsis-Promoters/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GTTGGGCG----
NNWWWTGGGCYTDDN

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTTGGGCG----
RGKGGGCGKGGC

hkb/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTTGGGCG---
--GGGGCGTTA

YPR022C/MA0436.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTTGGGCG
NGTGGGG--

HAP2/MA0313.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTTGGGCG
-TTGGT--

YGR067C/MA0425.1/Jaspar

Match Rank:7
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------GTTGGGCG
NNNNNNNGTGGGGN-

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTTGGGCG--
NGCGTGGGCGGR

MYB24/MA1037.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTTGGGCG
AAGTTAGGT-

btd/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTTGGGCG---
-GGGGGCGGAT